7.4 EMP_save_var

Thanks to the magrittr package’s pipe operator and the tidyverse syntax ecosystem, many data analysis workflows are being completed seamlessly using pipes. However, during a pipeline, if users need to save intermediate results to an environment variable for use in subsequent analyses, they often need to assign the result manually, disrupting the flow. The EMP_save_var function addresses this by allowing users to save the current result directly within the pipeline, ensuring a smooth and uninterrupted analysis process.

🏷️Example:

data(MAE)

MAE |> 
  EMP_assay_extract('geno_ec') |>
  EMP_save_var('temp_data') |>
  EMP_diff_analysis(method='DESeq2',.formula = ~Group)  |>
  EMP_save_var('diff_result',get_result = TRUE) |>
  EMP_heatmap_plot() 

## EMPT object
temp_data
## analysis result
diff_result
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